Seminars and Colloquia by Series

RNA folding prediction: the continued need for interaction between biologists and mathematicians

Series
Research Horizons Seminar
Time
Wednesday, April 10, 2013 - 12:05 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Christine HeitschGeorgia Tech, School of Math
A 1986 article with this title, written by M. Zuker and published by the AMS, outlined several major challenges in the area. Stating the folding problem is simple; given an RNA sequence, predict the set of (canonical, nested) base pairs found in the native structure. Yet, despite significant advances over the past 25 years, it remains largely unsolved. A fundamental problem identified by Zuker was, and still is, the "ill-conditioning" of discrete optimization solution approaches. We revisit some of the questions this raises, and present recent advances in considering multiple (sub)optimal structures, in incorporating auxiliary experimental data into the optimization, and in understanding alternative models of RNA folding.

"RNA folding prediction: the continued need for interaction between biologists and mathematicians"

Series
Research Horizons Seminar
Time
Wednesday, April 10, 2013 - 12:05 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Christine HeitschGeorgia Institute of Technology, School of Mathematics
A 1986 article with this title, written by M. Zuker and published by the AMS, outlined several major challenges in the area. Stating the folding problem is simple; given an RNA sequence, predict the set of (canonical, nested) base pairs found in the native structure. Yet, despite significant advances over the past 25 years, it remains largely unsolved. A fundamental problem identified by Zuker was, and still is, the "ill-conditioning" of discrete optimization solution approaches. We revisit some of the questions this raises, and present recent advances in considering multiple (sub)optimal structures, in incorporating auxiliary experimental data into the optimization, and in understanding alternative models of RNA folding.

Integrable systems as a tool in math-physics problems

Series
Research Horizons Seminar
Time
Wednesday, March 27, 2013 - 12:05 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Plamen IlievGeorgia Tech, School of Math
In the last few years many problems of mathematical and physical interest, which may not be Hamiltonian or even dynamical, were solved using techniques from integrable systems. I will review some of these techniques and their connections to some open research problems.

Algebraic Certificates in Optimization and Beyond

Series
Research Horizons Seminar
Time
Wednesday, March 6, 2013 - 12:05 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Greg BlekhermanGeorgia Tech, School of Math
I will discuss algebraic (sums of squares based) certificates for nonnegativity of polynomials and their use in optimization. Then I will discuss some recent results on degree bounds and state some open questions.

The Two Weight Inequality for the Hilbert Transform

Series
Research Horizons Seminar
Time
Wednesday, February 13, 2013 - 12:05 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Michael LaceyGeorgia Tech, School of Math
I'll introduce the Hilbert transform in a natural way justifying it as a canonical operation. In fact, it is such a basic operation, that it arises naturally in a range of settings, with the important complication that the measure spaces need not be Lebesge, but rather a pair of potentially exotic measures. Does the Hilbert transform map L^2 of one measure into L^2 of the other? The full characterization has only just been found. I'll illustrate the difficulties with a charming example using uniform measure on the standard 1/3 Cantor set.

From microscopic to macroscopic: some consideration on a simple model for a gas in or out of equilibrium

Series
Research Horizons Seminar
Time
Wednesday, February 6, 2013 - 12:05 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Federico BonettoGeorgia Tech, School of Math
The derivation of the properties of macroscopic systems (e.g. the air in a room) from the motions and interactions of their microscopic constituents is the principal goal of Statistical Mechanics. I will introduce a simplified model of a gas (the Kac model). After discussing its relation with more realistic models, I'll present some known results and possible extension.

Mathematics and the Foundations of Public Health

Series
Research Horizons Seminar
Time
Wednesday, January 30, 2013 - 12:05 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Howie WeissGeorgia Tech, School of Math
After some brief comments about the nature of mathematical modeling in biology and medicine, we will formulate and analyze the SIR infectious disease transmission model. The model is a system of three non-linear differential equations that does not admit a closed form solution. However, we can apply methods of dynamical systems to understand a great deal about the nature of solutions. Along the way we will use this model to develop a theoretical foundation for public health interventions, and we will observe how the model yields several fundamental insights (e.g., threshold for infection, herd immunity, etc.) that could not be obtained any other way. At the end of the talk we will compare the model predictions with data from actual outbreaks.

Supersingular curves

Series
Research Horizons Seminar
Time
Wednesday, January 23, 2013 - 12:05 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Doug UlmerGeorgia Tech, School of Math
I will review a little bit of the theory of algebric curves, which essentialy amounts to studying the zero set of a two-variable polynomial. There are several amazing facts about the number of points on a curve when the ground field is finite. (This particular case has many applications to cryptography and coding theory.) An open problem in this area is whether there exist "supersingular" curves of every genus. (I'll explain the terminology, which has something to do with having many points or few points.) A new project I have just started should go some way toward resolving this question.

Stochastic Differential Equations, Intermittent Diffusion, and Shortest Path

Series
Research Horizons Seminar
Time
Wednesday, January 16, 2013 - 12:05 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Hao Min ZhouGeorgia Tech, School of Math
In this talk, I will use the shortest path problem as an example to illustrate how one can use optimization, stochastic differential equations and partial differential equations together to solve some challenging real world problems. On the other end, I will show what new and challenging mathematical problems can be raised from those applications. The talk is based on a joint work with Shui-Nee Chow and Jun Lu. And it is intended for graduate students.

Pages