Seminars and Colloquia by Series

Non-negative CP tensor decomposition to identify response signatures in omics time-course experiments

Series
Mathematical Biology Seminar
Time
Wednesday, April 27, 2022 - 10:00 for 1 hour (actually 50 minutes)
Location
ONLINE
Speaker
Anna KonstorumYale University

Please Note: Meeting Link: https://gatech.zoom.us/j/94882290086 (Meeting ID: 948 8229 0086, Passcode: 264830)

A central goal of biological experiments that generate omics time-course data is the discovery of patterns, or signatures, of response. A natural representation of such data is in the form of a third-order tensor. For example, if the dataset is from a bulk RNASeq experiment, which measures tissue-level gene expression collected at multiple time points, the data can be structured into a gene-by-subject-by-time tensor. We consider the use of a non-negative CANDECOMP/PARAFAC (CP) decomposition (NCPD) on the tensor to derive rank-one components that correspond to biologically meaningful signatures.  To assess whether over-factoring has occurred in a model, we develop the maximum internal n-similarity score (mINS) score. We use the mINS as well as other metrics to choose a model rank for downstream analysis. We show that on time-course data profiling vaccination responses against the Influenza and Bordetella Pertussis pathogens, our NCPD pipeline yields novel and informative signatures of response. We finish with outstanding research challenges in the application of tensor decomposition to modern biological datasets.

Hodge theory of mapping class group dynamics

Series
Algebra Seminar
Time
Tuesday, April 26, 2022 - 12:00 for 1 hour (actually 50 minutes)
Location
Skiles 006
Speaker
Daniel LittUniversity of Georgia

This is joint work with Aaron Landesman. There are a number of difficult open questions around representations of free and surface groups, which it turns out are accessible to methods from Hodge theory and arithmetic geometry. For example, I'll discuss applications of these methods to the following concrete theorem about surface groups, whose proof relies on non-abelian Hodge theory and the Langlands program:

Theorem. Let $\rho: \pi_1(\Sigma_{g,n})\to GL_r(\mathbb{C})$ be a representation of the fundamental group of a compact orientable surface of genus $g$ with $n$ punctures, with $r<\sqrt{g+1}$. If the conjugacy class of $\rho$ has finite orbit under the mapping class group of $\Sigma_{g,n}$, then $\rho$ has finite image.

This answers a question of Peter Whang. I'll also discuss closely related applications to the Putman-Wieland conjecture on homological representations of mapping class groups. 

On the size Ramsey number of graphs

Series
Graph Theory Seminar
Time
Tuesday, April 26, 2022 - 11:00 for 1 hour (actually 50 minutes)
Location
Skiles 005/Zoom (hybrid)
Speaker
Meysam MiralaeiInstitute for Research in Fundamental Sciences, Iran

Please Note: Note the unusual time!

For given graphs $G$ and $H$ and a graph $F$, we say that $F$ is Ramsey for $(G, H)$ and we write $F \longrightarrow (G,H)$, if for every $2$-edge coloring of $F$, with colors red and blue, the graph $F$ contains either a red copy of $G$ or a blue copy of $H$. A natural question is how few vertices can a graph $F$ have, such that $F \longrightarrow (G,H)$? Frank P. Ramsey studied this question and proved that for given graphs $G$ and $H$, there exists a positive integer $n$ such that for the complete graph $K_n$ we have $ K_n \longrightarrow (G,H)$. The smallest such $n$ is known as the Ramsey number of $G$, $H$ and is denoted by $R(G, H)$. Instead of minimizing the number of vertices, one can ask for the minimum number of  edges of such a graph, i.e. can we find a graph which possibly has more vertices than $R(G, H)$, but has fewer edges and still is Ramsey for $(G,H)$? How many edges suffice to construct a graph which is Ramsey for $(G,H)$? The attempts at answering the last question give rise to the notion of size-Ramsey number of graphs. In 1978, Erdős, Faudree, Rousseau and Schelp pioneered the study of the size-Ramsey number to be the minimum number of edges in a graph $F$, such that $F$ is Ramsey for $(G,H)$. In this talk, first I will give a short history about the size Ramsey number of graphs with a special focus on sparse graphs. Moreover, I will talk about the multicolor case of the size Ramsey number of cycles with more details.

Strict hyperbolization and special cubulation

Series
Geometry Topology Seminar
Time
Monday, April 25, 2022 - 14:00 for 1 hour (actually 50 minutes)
Location
skies 006
Speaker
Ruffoni, Lorenzo Tufts University

Abstract: Gromov introduced some “hyperbolization” procedures, i.e. some procedures that turn a given polyhedron into a space of non-positive curvature. Charney and Davis developed a refined “strict hyperbolization” procedure that outputs a space of strictly negative curvature. Their procedure has been used to construct new examples of manifolds and groups with negative curvature, and other prescribed features. We construct actions of the resulting groups on CAT(0) cube complexes. As an application, we obtain that they are virtually special, hence linear over the integers and residually finite. This is joint work with J. Lafont.

Recent advances on structure-preserving algorithms

Series
Applied and Computational Mathematics Seminar
Time
Monday, April 25, 2022 - 14:00 for 1 hour (actually 50 minutes)
Location
https://gatech.zoom.us/j/96551543941
Speaker
Philippe G. LeFlochSorbonne Univ. and CNRS
Structure-preserving methodologies led to interesting advances on the design of computational algorithms: one observes that an (obvious or hidden) structure is enjoyed by the problem under consideration and one then designs numerical approximations enjoying the same structure at the discrete level. For problems involving a large number of dimensions, for instance in mathematical finance and machine learning, I have introduced the 'transport-based mesh-free method' which uses a reproducing kernel and a transport mapping in a way that is reminiscent of Lagrangian methods developed in computational fluid dynamics. This method is now implemented in a Python library (CodPy) and used in industrial applications. 
 
In compressible fluid dynamics, astrophysics, or cosmology, one needs to compute with propagating singularities, such as shock waves, moving interfaces, or gravitational singularities, I will overview recent progress on structure-preserving algorithms in presence of small-scale dependent waves which drive the global flow dynamics. I recently introduced asymptotic-preserving or dissipation-preserving methods adapted to such problems. This lecture is based on joint collaborations with F. Beyer (Dunedin), J.-M. Mercier (Paris), S. Miryusupov (Paris), and Y. Cao (Shenzhen). Blog: philippelefloch.org 

Partitioning cubic graphs into isomorphic linear forests

Series
Combinatorics Seminar
Time
Friday, April 22, 2022 - 15:00 for 1 hour (actually 50 minutes)
Location
Skiles 005
Speaker
Liana YepremyanEmory University

A cubic graph is one where every vertex has degree three. A linear forest is a disjoint union of paths. It is known that the edge set of every cubic graph can be partitioned into two linear forests where each path is short (of constant size). A conjecture of Wormald asks for such a partition where the two forests are isomorphic (we no longer insist on having short paths, although that is also an open question). Note that this also can be phrased as an edge-colouring question. Is it possible to colour the edge set of a cubic graph by red and blue such that the two monochromatic components induce isomorphic linear forests? Recently we proved this for all connected graphs on a sufficiently large number of vertices. I will talk about the result and give some idea of the proof method. This is joint work with Gal Kronenberg, Shoham Letzter and Alexey Pokrovskiy.

The clique chromatic number of sparse random graphs

Series
ACO Student Seminar
Time
Friday, April 22, 2022 - 13:00 for 1 hour (actually 50 minutes)
Location
Skiles 254
Speaker
Manuel FernandezMathematics, Georgia Tech

Please Note: Streaming online at https://gatech.zoom.us/j/91232113113?pwd=MDhteEdtcENuME9kdXJmcUY0eWlSUT09

The clique chromatic number of a graph is the smallest number of colors in a vertex coloring so that no inclusion-maximal clique is monochromatic (ignoring isolated vertices). 

For the binomial random graph G_{n,p} the clique chromatic number has been studied in a number of works since 2016, but for sparse edge-probabilities in the range n^{-2/5} \ll p \ll 1 even the order of magnitude remained a technical challenge.

Resolving open problems of Alon and Krivelevich as well as Lichev, Mitsche and Warnke, we determine the clique chromatic number of the binomial random graph G_{n,p} in most of the missing regime: we show that it is of order (\log n)/p for edge-probabilities n^{-2/5+\eps} \ll p \ll n^{-1/3} and n^{-1/3+\eps} \ll p \ll 1, for any constant \eps > 0.

Perhaps surprisingly for a result about random graphs, a key ingredient in the proof is an application of the probabilistic method (that hinges on careful counting and density arguments).

This talk is based on joint work with Lutz Warnke.

Quasi periodic motions of the generalized SQG equations

Series
CDSNS Colloquium
Time
Friday, April 22, 2022 - 13:00 for 1 hour (actually 50 minutes)
Location
Skiles 005; streaming via Zoom available
Speaker
Jaemin ParkUniversity of Barcelona

Please Note: Link for streaming: https://us06web.zoom.us/j/83392531099?pwd=UHh2MDFMcGErbzFtMHBZTmNZQXM0dz09

In this talk, we study the existence of quasi periodic solutions to the generalized Surface Quasi-Geostropic (gSQG) equations. Despite its similar structure with the 2D Euler equation, the global existence/finite time singularity formation of gSQG equations have been open for a long time. Exploiting its Hamiltonian structure, we are able to construct a quasi periodic solutions with the initial date that are sufficiently close to its steady states. This is a joint work with Javier Gomez-Serrano and Alex Ionescu.

Ranks of points via Macaulay 2 (2nd talk)

Series
Algebra Student Seminar
Time
Friday, April 22, 2022 - 11:00 for 1 hour (actually 50 minutes)
Location
Skiles 006 and Teams
Speaker
Jaewoo JungGeorgia Tech

The rank of a point $p$ with respect to a non-degenerate variety is the smallest number of the points in the variety that spans the point $p$. Studies about the ranks of points are important in various areas of applied mathematics and engineering in the sense that they are the smallest number of summands in the decompositions of vectors into combinations of simple vectors.

In the last talk, we discussed how to generate points of given ranks with respect to the rational normal curves. We continue to discuss some known facts via Macaulay 2 and how to find the list of all ranks of points in linear spaces.

 

Links to Teams: https://teams.microsoft.com/l/meetup-join/19%3a3a9d7f9d1fca4f5b991b4029b09c69a1%40thread.tacv2/1650576543136?context=%7b%22Tid%22%3a%22482198bb-ae7b-4b25-8b7a-6d7f32faa083%22%2c%22Oid%22%3a%221269007f-fe20-4c2c-b6fa-a7e0eff0131e%22%7d

The HRT Conjecture for single perturbations of confi gurations

Series
Analysis Seminar
Time
Wednesday, April 20, 2022 - 14:00 for 1 hour (actually 50 minutes)
Location
Klaus 1447
Speaker
Kasso OkoudjouTufts University

 In 1996, C.~Heil, J.~Ramanatha, and P.~Topiwala conjectured that the (finite) set $\mathcal{G}(g, \Lambda)=\{e^{2\pi i b_k \cdot}g(\cdot - a_k)\}_{k=1}^N$ is linearly independent for any  non-zero square integrable function $g$ and  subset $\Lambda=\{(a_k, b_k)\}_{k=1}^N \subset \mathbb{R}^2.$ This problem is now known as the HRT Conjecture, and is still largely unresolved. 

 

In this talk,  I will then introduce an inductive approach to investigate the conjecture, by attempting to answer the following question. Suppose the HRT conjecture is true for a function $g$ and a fixed set of $N$ points $\Lambda=\{(a_k, b_k)\}_{k=1}^N \subset \mathbb{R}^2.$ For what other point $(a, b)\in \mathbb{R}^2\setminus \Lambda$ will the HRT remain true for the same function $g$ and the new set of $N+1$ points $\Lambda'=\Lambda \cup \{(a, b)\}$?  I will report on a recent joint work with V.~Oussa in which we use this approach to prove the conjecture when the initial configuration  $\Lambda=\{(a_k, b_k)\}_{k=1}^N $  is either a subset of the unit lattice $\mathbb{Z}^2$ or a subset of a line $L$.   

 

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